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MSigDB in a data frame (mouse) by gene symbol

Source: R/data.R
msigdf.mouse.Rd

A data frame containing the Molecular Signatures Database (MSigDB) gene sets for mouse, with gene symbols.

Usage

msigdf.mouse

Format

A data frame with 4 variables: category_code, category_subcode, geneset, and symbol.

Source

http://software.broadinstitute.org/gsea/msigdb/

Examples

head(msigdf.mouse)
#> # A tibble: 6 × 4
#>   category_code category_subcode geneset symbol 
#>   <chr>         <chr>            <chr>   <chr>  
#> 1 m1            all              MT      mt-Atp6
#> 2 m1            all              MT      mt-Atp8
#> 3 m1            all              MT      mt-Co1 
#> 4 m1            all              MT      mt-Co2 
#> 5 m1            all              MT      mt-Co3 
#> 6 m1            all              MT      mt-Cytb